Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCTTCTGCAGCA
.....(((((((..((((((.&))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363695
GeneSymbolPPT1
Binding site1432,1448
Score0.846
Seed0
Au0.5
Energy-20.6
Binding len16
Me-15.812
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure