Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCACGCGGTGCAC
.((((.(((((((((((....&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001269050
GeneSymbolCTCFL
Binding site36,53
Score0.846
Seed0
Au0.265
Energy-19.9
Binding len17
Me-5.694
Phylopstem-0.7678413000000001
Phylopflank-0.2478916560769231
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure