Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATTTCATTATGCCAGA
..((((((((.(((((((....&)))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270
GeneSymbolCHD1
Binding site2585,2605
Score0.846
Seed1
Au0.618
Energy-18.4
Binding len20
Me-7.782
Phylopstem3.300847375
Phylopflank3.641760958750001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure