Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAAGACAGCTGCCTGCCTGGCTGCC
..((((((((((((((.....&.))))))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270365
GeneSymbolALDH1L1
Binding site1572,1601
Score0.846
Seed1
Au0.412
Energy-19.8
Binding len22
Me-4.957
Phylopstem3.781048975
Phylopflank3.3440171661250004
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end3
PositionCDS
2D Structure