Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTACAGGCAACCAGCACTGCAGA
((((((.(((((((((.....&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270392
GeneSymbolRASSF6
Binding site3317,3343
Score1.0
Seed0
Au0.485
Energy-20.6
Binding len18
Me-5.481
Phylopstem0.02747392000000002
Phylopflank0.20778423375000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure