Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGATGACTGCAGCCCTGTC
..(((((((((((((((((((&)))))...)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270392
GeneSymbolRASSF6
Binding site5215,5240
Score1.0
Seed1
Au0.515
Energy-20.4
Binding len25
Me-4.957
Phylopstem2.4882319583333334
Phylopflank0.88853041
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure