Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAATAACTGCAAGGGCTCTGCTGACAT
.(((((((((((((((.((((&))))...)))))))))........)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270397
GeneSymbolG6PC1
Binding site20,52
Score0.923
Seed1
Au0.471
Energy-18.5
Binding len32
Me-3.793
Phylopstem0.30558454166666665
Phylopflank1.4304654657352942
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end7
Position5UTR
2D Structure