Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGTAGTTGA
...(((((((((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270400
GeneSymbolTUBA1A
Binding site723,737
Score0.923
Seed0
Au0.441
Energy-19.1
Binding len14
Me-6.515
Phylopstem4.75995876923077
Phylopflank5.23825530125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure