Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTAGCAAGGTTGTG
..((((((((((((((((((.&)))))))))).)))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270403
GeneSymbolKCNE1
Binding site1019,1041
Score0.846
Seed1
Au0.456
Energy-21.4
Binding len22
Me-4.957
Phylopstem-0.8780606428571431
Phylopflank-0.6102178312500002
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure