Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTACAGGGTCACTTGGTTCATCTCCTGGAGCCCCTGCTTCTCCTGGGGCTGTGCCGGGG
.(((((((((...(.(((....&.))).)..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270411
GeneSymbolAPOBEC3B
Binding site843,906
Score0.846
Seed1
Au0.368
Energy-17.9
Binding len18
Me-11.989
Phylopstem1.533159666666667
Phylopflank0.7227157987499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure