Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTCCAACTGCAAGGACGCTGTAAG
(((((((((((((((...(((&)))...)))))))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270411
GeneSymbolAPOBEC3B
Binding site12,39
Score0.923
Seed1
Au0.529
Energy-20.3
Binding len27
Me-4.171
Phylopstem-0.21245000000000003
Phylopflank-0.36806249999999996
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end5
Position5UTR
2D Structure