Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAACTTTGGCTGCT
..(((((((.((((((((...&)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270422
GeneSymbolKCNJ16
Binding site2850,2867
Score0.923
Seed1
Au0.515
Energy-20.0
Binding len17
Me-6.2
Phylopstem-0.007614262500000017
Phylopflank-0.6611699387500001
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure