Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCACCAGCATGGCAACGTCTTCACAGTACCGCCAGCTGCT
..((((((((((((((((((.&.)))).)))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270434
GeneSymbolCDK2AP1
Binding site165,210
Score0.923
Seed1
Au0.382
Energy-22.4
Binding len24
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure