Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGGCGGGCAGCTGCC
..(((((((((.((((.....&)))).)..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270434
GeneSymbolCDK2AP1
Binding site120,137
Score0.846
Seed1
Au0.294
Energy-19.3
Binding len17
Me-8.304
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure