Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGGACTGCAGGTAAAATGCAAT
(((((.((((((((..(((((&)))))..)))))))).).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270436
GeneSymbolCDC42EP3
Binding site2742,2769
Score1.0
Seed0
Au0.647
Energy-20.0
Binding len27
Me-6.807
Phylopstem0.8270405625
Phylopflank0.2703439575
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure