Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCCGGAGCTGTAT
.(((((((.(((..((.....&))..))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270436
GeneSymbolCDC42EP3
Binding site1171,1187
Score1.0
Seed1
Au0.588
Energy-19.8
Binding len16
Me-6.996
Phylopstem0.1921777285714286
Phylopflank0.14034446425
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure