Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGGACTGCAGGTAAAATGCAAT
(((((.((((((((..(((((&)))))..)))))))).).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270438
GeneSymbolCDC42EP3
Binding site2774,2801
Score0.846
Seed0
Au0.647
Energy-20.0
Binding len27
Me-6.807
Phylopstem-0.18179943750000002
Phylopflank0.35655386
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure