Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCGCGCCCAGCTGCAGT
(((((((((.((.(((..(((&)))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270439
GeneSymbolARPC5
Binding site3879,3900
Score1.0
Seed1
Au0.559
Energy-21.3
Binding len21
Me-6.469
Phylopstem0.18121386666666667
Phylopflank-0.009467429999999985
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure