Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGAGCCCAGCTGCC
..(((((((.((((....(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270441
GeneSymbolRTBDN
Binding site539,557
Score0.846
Seed1
Au0.426
Energy-19.8
Binding len18
Me-7.168
Phylopstem1.2283965714285714
Phylopflank0.4927298012499999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure