Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGAGCCCAGCTGCC
..(((((((.((((....(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270443
GeneSymbolRTBDN
Binding site516,534
Score0.923
Seed1
Au0.426
Energy-19.8
Binding len18
Me-7.168
Phylopstem0.4383235714285715
Phylopflank0.8500100475000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure