Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCGCTCTGCGAG
((((((..((((((((.....&)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270444
GeneSymbolRTBDN
Binding site406,422
Score1.0
Seed0
Au0.324
Energy-21.7
Binding len16
Me-7.795
Phylopstem-0.3533090625
Phylopflank0.63428681375
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure