Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGAGCCCAGCTGCC
..(((((((.((((....(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270444
GeneSymbolRTBDN
Binding site504,522
Score0.923
Seed1
Au0.426
Energy-19.8
Binding len18
Me-7.168
Phylopstem0.2609221428571429
Phylopflank0.8022413125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure