Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGAGCCCAGCTGCC
..(((((((.((((....(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270445
GeneSymbolRTBDN
Binding site498,516
Score0.846
Seed1
Au0.426
Energy-19.8
Binding len18
Me-7.168
Phylopstem2.0687284285714287
Phylopflank0.7748902150000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure