Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGCAGCTCGGGCGCCCGCGGCAGGCGATCAGTGGGTGACCGCGGCTGCGAG
((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270468
GeneSymbolSOCS2
Binding site179,233
Score1.0
Seed1
Au0.324
Energy-26.3
Binding len16
Me-4.906
Phylopstem0.013853507142857139
Phylopflank0.5695067549999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure