Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGCCGCGGCCGAGGTCGAGGCGATCAGTGGGTGACCGCGGCTGCGAG
((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270469
GeneSymbolSOCS2
Binding site31,83
Score1.0
Seed1
Au0.353
Energy-26.3
Binding len16
Me-4.906
Phylopstem0.4486517428571428
Phylopflank0.7569796072727273
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure