Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAACTACAGGCATTGTCAAGTGGCCGGGTC
((((((((((((((((......&.)))))))...))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270470
GeneSymbolSOCS2
Binding site2517,2548
Score0.846
Seed1
Au0.618
Energy-18.2
Binding len22
Me-3.938
Phylopstem0.04965855000000001
Phylopflank0.10531178250000003
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end2
Position3UTR
2D Structure