Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCGCACCCCGGGCGATCAGTGGGTGACCGCGGCTGCGAG
((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270470
GeneSymbolSOCS2
Binding site491,534
Score0.885
Seed1
Au0.324
Energy-26.3
Binding len16
Me-4.906
Phylopstem-0.43758924285714285
Phylopflank0.30909747499999995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure