Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGGAGAGCGAGCTGTGGCTGCGC
.(((((((((((((...((((&))))...........))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270484
GeneSymbolTBXT
Binding site545,574
Score0.846
Seed1
Au0.382
Energy-21.5
Binding len29
Me-4.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure