Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGGCTGGAGTGCAGCGGCATGACTGCAGC
((((((((((.((((((((((&)))).........)))))).))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270488
GeneSymbolTAF11
Binding site1022,1055
Score0.923
Seed1
Au0.426
Energy-21.0
Binding len33
Me-6.762
Phylopstem5.735600210526316
Phylopflank4.843413398750001
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure