Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGTCCCTGTTCCTGCTGGGTGGCCAGGC
.((((((.(((...((((....&.))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270501
GeneSymbolCA6
Binding site36,69
Score0.846
Seed1
Au0.382
Energy-19.2
Binding len18
Me-11.6
Phylopstem1.3786460499999997
Phylopflank0.6215527881756756
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure