Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCTCAGCTGCCACTGCAAC
((((((..(((((((...(((&)))...)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270508
GeneSymbolTNFAIP3
Binding site2745,2767
Score0.846
Seed0
Au0.441
Energy-21.0
Binding len22
Me-8.028
Phylopstem-0.11405059999999999
Phylopflank0.2807377
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure