Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGTTCAGAATGCAACCCTGGCTGTG
..(((((((.(((((((....&.))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270527
GeneSymbolSTOM
Binding site433,462
Score0.846
Seed1
Au0.485
Energy-19.2
Binding len17
Me-6.2
Phylopstem0.3191353857142857
Phylopflank0.009473347499999993
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure