Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCAGATACTGTGAGGC
.(((.(((.....(((((((((&))))))))).....))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270530
GeneSymbolRNF111
Binding site4371,4393
Score0.846
Seed0
Au0.632
Energy-17.3
Binding len22
Me-17.672
Phylopstem3.083668888888889
Phylopflank2.645407725
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure