Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAGCTGCAATCTTTGGCCATCAGGCCGCTGCTGCT
..(((((.((((((....(((&.)))....)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270530
GeneSymbolRNF111
Binding site2077,2114
Score0.846
Seed0
Au0.471
Energy-23.5
Binding len21
Me-8.239
Phylopstem3.926658166666666
Phylopflank3.8818344289999986
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure