Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGGAACAGCTAGATATATGAGCAT
.((((((((...(((((((((&)))))))))...)))))..........))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270572
GeneSymbolCSNK1G3
Binding site869,900
Score0.923
Seed1
Au0.647
Energy-18.8
Binding len31
Me-11.207
Phylopstem5.0044216666666665
Phylopflank5.797686563749999
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure