Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTCACTGCAGTTGA
...(((((((((.((..((((&))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270584
GeneSymbolIQCA1
Binding site2380,2398
Score1.0
Seed0
Au0.559
Energy-20.4
Binding len18
Me-8.037
Phylopstem0.43555095555555556
Phylopflank1.4709212025000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure