Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGAATGTCAGCTGCC
..(((((((..(((.((((((&)))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270584
GeneSymbolIQCA1
Binding site2267,2286
Score0.923
Seed1
Au0.426
Energy-20.4
Binding len19
Me-9.76
Phylopstem-0.4567611428571428
Phylopflank1.7009869887500009
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure