Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTCACTGCAGTTGA
...(((((((((.((..((((&))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270585
GeneSymbolIQCA1
Binding site2350,2368
Score1.0
Seed0
Au0.559
Energy-20.4
Binding len18
Me-8.037
Phylopstem3.445545
Phylopflank0.5492606975
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure