Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGAATGTCAGCTGCC
..(((((((..(((.((((((&)))))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270585
GeneSymbolIQCA1
Binding site2237,2256
Score1.0
Seed1
Au0.426
Energy-20.4
Binding len19
Me-9.76
Phylopstem0.8624941714285715
Phylopflank1.1219195725
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure