Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTTTTGTAAATAAATTTGTTTGTACATTGTATGCTTTTTTTTTAGTTTAAATATACTGTCAGTGTAGGTA
(((((((((((((((((.(...&.).)))))))))))))..............................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270629
GeneSymbolMED4
Binding site1261,1333
Score0.846
Seed1
Au0.721
Energy-19.5
Binding len51
Me-3.938
Phylopstem-0.05862359148936172
Phylopflank0.13724352124999997
Longest consecutive pairings13
Position of longest consecutive pairings35
Pairings in 3prime end4
Position3UTR
2D Structure