Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGTAAATCCAGTTGCAT
.((((((((.((((...(((.&)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270629
GeneSymbolMED4
Binding site1343,1362
Score0.846
Seed1
Au0.706
Energy-16.7
Binding len19
Me-6.004
Phylopstem0.17824225000000002
Phylopflank-0.08667150750000002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure