Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCCACACCCCTGCTCCCCACTGCCGCTGCTGCC
..(((((.(((((.((..((.&.))..)).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270640
GeneSymbolJOSD2
Binding site772,806
Score0.885
Seed0
Au0.375
Energy-22.1
Binding len20
Me-8.127
Phylopstem0.2372332
Phylopflank0.46226324499999993
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure