Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCCACACCCCTGCTCCCCACTGCCGCTGCTGCC
..(((((.(((((.((..((.&.))..)).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270641
GeneSymbolJOSD2
Binding site649,683
Score0.885
Seed0
Au0.375
Energy-22.1
Binding len20
Me-8.127
Phylopstem0.2372332
Phylopflank0.4838111824999999
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure