Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGGCCGCCGGGCTGCT
..(((((((((((((......&)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270649
GeneSymbolSLC5A10
Binding site3236,3252
Score0.846
Seed1
Au0.338
Energy-21.0
Binding len16
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end2
Position3UTR
2D Structure