Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTGTATTGCG
.....((((((((((((((...&)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001270660
GeneSymbolMARCHF6
Binding site6197,6213
Score1.0
Seed0
Au0.574
Energy-18.1
Binding len16
Me-13.666
Phylopstem0.293792128
Phylopflank0.15805647850000004
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure