Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCTGGCGGCTGCGCTGG
...((((.(((((((((((((&)))))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270686
GeneSymbolJOSD2
Binding site599,621
Score0.846
Seed0
Au0.309
Energy-21.0
Binding len22
Me-8.828
Phylopstem1.9378890352941178
Phylopflank2.591519355
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure