Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGCAGCCGCGGGGCGGACTAAGAAGGGAGCCGCCTGCTGCGAG
((((((((((((((((..(((&))).))))))))).........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270695
GeneSymbolARHGAP12
Binding site133,179
Score0.846
Seed1
Au0.324
Energy-23.7
Binding len46
Me-3.938
Phylopstem1.8432009024390243
Phylopflank1.2686733450000003
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end6
Position5UTR
2D Structure