Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAATGCCATTCAGCTGTAAC
(((((((((.(((.....(((&)))....)))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270782
GeneSymbolTFAM
Binding site3364,3387
Score1.0
Seed1
Au0.632
Energy-17.5
Binding len23
Me-7.005
Phylopstem0.5138811111111111
Phylopflank0.12921423625000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure