Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGGTTACCTCAGCAGCTGCAGT
(((((((((((((....(((.&))).....)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270875
GeneSymbolMEAF6
Binding site294,319
Score0.846
Seed1
Au0.471
Energy-21.8
Binding len25
Me-5.763
Phylopstem0.7318329625000001
Phylopflank-0.1598067325
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure