Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAAGACAACCAACAGCTGG
...((((((.((((((..(((&))).....))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001270879
GeneSymbolMPC1
Binding site980,1003
Score0.846
Seed0
Au0.588
Energy-18.7
Binding len23
Me-7.757
Phylopstem0.7164644666666667
Phylopflank0.16142695624999998
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure